BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022E12SP1|AL427922
(973 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1011 1899 0.0
>3x_Contig1011
Length = 3580
Score = 1899 bits (956), Expect = 0.0
Identities = 969/974 (99%), Gaps = 1/974 (0%)
Strand = Plus / Plus
Query: 1 gaggactgttattgatattgtcttgaatttgagaaatggtgttgttcaactcttggataa 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gaggactgttattgatcttgtcttgaatttgagaaatggtgttgttcaactcttggataa 389
Query: 61 gcttcgtagtggcttcaaattccggatctgaggaagagatagtttgctgcaagtgtctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gcttcgtagtggcttcaaattccggatctgaggaagagatagtttgctgcaagtgtctaa 449
Query: 121 tgatcgaatcaaggattcgactcagtaggaaatgaaaccctttgaaatatgtgaaatcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tgatcgaatcaaggattcgactcagtaggaaatgaaaccctttgaaatatgtgaaatcat 509
Query: 181 ctgcg-tttctcacttcatccctgaacaacaacttcttaaagtcattttcaatgagggca 239
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ctgcgctttctcacttcatccctgaacaacaacttcttaaagtcattttcaatgagggca 569
Query: 240 tcgatatccacacattttcttgatagaacaatataccgtttgatgaactgagatacagaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tcgatatccacacattttcttgatagaacaatataccgtttgatgaactgagatacagaa 629
Query: 300 tggttttccatagtataattatcgaaatcattctcgctaccgcgtctatacaacagcttc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tggttttccatagtataattatcgaaatcattctcgctaccgcgtctatacaacagcttc 689
Query: 360 ggcataccgtctgatctatggtagatagaacaataccaaacaaagagtaagagatgaatg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ggcataccgtctgatctatggtagatagaacaataccaaacaaagagtaagagatgaatg 749
Query: 420 atcggattactgaatacattcatcgattgtgttacagtttcctttgaatcatccctagtc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 atcggattactgaatacattcatcgattgtgttacagtttcctttgaatcatccctagtc 809
Query: 480 aataggagcgtggttgcmaataatttcacttggaataatagggtgctgaaaactaatttt 539
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 aataggagcgtggttgcaaataatttcacttggaataatagggtgctgaaaactaatttt 869
Query: 540 ttcactaatggatccacaaggaccatatccgtatcatgttggacacttgagataataggt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 ttcactaatggatccacaaggaccatatccgtatcatgttggacacttgagataataggt 929
Query: 600 agacaacaaatggccaaattgttattgatatttttttctatcaaagggattgattttmat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 930 agacaacaaatggccaaattgttattgatatttttttctatcaaagggattgattttaat 989
Query: 660 tcttgcaatatgctttccgcagagaagtctactctgtgatggaaccatctgttatttaga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 990 tcttgcaatatgctttccgcagagaagtctactctgtgatggaaccatctgttatttaga 1049
Query: 720 tggaattttgcccagctgacattaacagtctcttttgttggcggtatcacatcctgtatg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1050 tggaattttgcccagctgacattaacagtctcttttgttggcggtatcacatcctgtatg 1109
Query: 780 aattcgaaccaggtagcaatatacaattgccaatattgggaagcggatgggttgacacag 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1110 aattcgaaccaggtagcaatatacaattgccaatattgggaagcggatgggttgacacag 1169
Query: 840 tacgaattgatcatatcaacaaattttggaggagcatgcaagataaatacttgaattttc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1170 tacgaattgatcatatcaacaaattttggaggagcatgcaagataaatacttgaattttc 1229
Query: 900 caagtgttgaatgcagtactttttggatccgaattctgtgtttgtcttaagaamtttgat 959
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1230 caagtgttgaatgcagtactttttggatccgaattctgtgtttgtcttaagaactttgat 1289
Query: 960 gccaatctgtttac 973
||||||||||||||
Sbjct: 1290 gccaatctgtttac 1303
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8000
Number of Sequences: 1807
Number of extensions: 8000
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 973
length of database: 10,358,551
effective HSP length: 16
effective length of query: 957
effective length of database: 10,329,639
effective search space: 9885464523
effective search space used: 9885464523
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)